Nextflow workflow report

[nauseous_meninsky] (resumed run)

Workflow execution completed successfully!
Run times
20-Oct-2020 19:27:02 - 21-Oct-2020 02:43:33 (duration: 7h 16m 31s)
  1000 succeeded  
  20 cached  
  0 ignored  
  0 failed  
Nextflow command
nextflow run -c /home/jlsmith3/nextflow.config kallisto.nf --sample_sheet sample_sheets/BEAT_AML_sample_sheet.txt --index 's3://fh-pi-meshinchi-s/SR/Reference_Data/Kallisto_Index/GRCh38.v29/gencode.v29_RepBase.v24.01.idx' --picard_out_dir 's3://fh-pi-meshinchi-s/SR/BEAT_AML/RNAseq_Illumina_Data/Fastq/' --kallisto_out_dir 's3://fh-pi-meshinchi-s/SR/BEAT_AML/RNAseq_Illumina_Data/Kallisto/' --stranded None --skip_picard FALSE -work-dir 's3://fh-pi-meshinchi-s/SR/work' -with-report BEAT_AML_report.html -cache TRUE -resume
CPU-Hours
2'026.0 (1.6% cached)
Launch directory
/home/jlsmith3/scripts/batch_pipeline
Work directory
s3://fh-pi-meshinchi-s/SR/work
Project directory
/home/jlsmith3/scripts/batch_pipeline
Script name
kallisto.nf
Script ID
4f6b46e8b783f2a576dbd1e5852e1a9d
Workflow session
332321a8-b675-4663-bef9-ee75eb56484c
Workflow profile
standard
Nextflow version
version 20.04.1, build 5335 (03-05-2020 19:37 UTC)

Resource Usage

These plots give an overview of the distribution of resource usage for each process.

CPU

Memory

Job Duration

I/O

Tasks

This table shows information about each task in the workflow. Use the search box on the right to filter rows for specific values. Clicking headers will sort the table by that value and scrolling side to side will reveal more columns.

(tasks table omitted because the dataset is too big)